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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-873
Gene Name: zRAB1B, member RAS oncogene family a
Gene Symbol: rab1ba    Nomenclature History

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Previous Name: zgc:56049

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have GTPase activity. Predicted to be involved in Rab protein signal transduction and intracellular protein transport. Predicted to localize to the Golgi membrane. Orthologous to human RAB1B (RAB1B, member RAS oncogene family).
Genome Resources: Alliance (1),  Gene:394117 (1),  Ensembl(GRCz11):ENSDARG00000058044 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20892 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34028 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rab1ba HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rab1ba VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process autophagosome assembly (more)
    Cellular Component endomembrane system (more)
    Molecular Function GTPase activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001806 (1)
  • InterPro:IPR005225 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00071 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rab1ba-201 (1)    Ensembl 3005
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM rab1ba No data available
    MARKER RELATIONSHIPS
    rab1ba Contained in: [BAC] CH73-40A2 (1) (order this)
    rab1ba Encodes: [cDNA] MGC:56049 (1) (order this), MGC:192181 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201142 (1) 2982 bp
    Genomic GenBank:CU570987 (1) 125684 bp
    Select Tool
    Polypeptide UniProtKB:Q7ZUV5 (1) 201 aa
    Sequence Clusters UniGene:78500 (1)
    Sequence Information (all 17)
    ORTHOLOGY for rab1ba ( Chr: 7 )
    CITATIONS (17)