ZFIN ID: ZDB-GENE-040426-821
Gene Name: CDC5 cell division cycle 5-like (S. pombe)
Gene Symbol: cdc5l    Nomenclature History

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Previous Name: zgc:55853

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to be involved in cell division. Human ortholog(s) of this gene implicated in osteosarcoma. Orthologous to human CDC5L (cell division cycle 5 like).
Genome Resources: Alliance (1),  Gene:394059 (1),  Ensembl(GRCz11):ENSDARG00000043797 (2)
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55853]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH cdc5l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH cdc5l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell cycle (more)
Molecular Function DNA binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR001005 SANT/Myb domain
Homologous_superfamily IPR009057 Homeobox-like domain superfamily
Domain IPR017930 Myb domain
Domain IPR021786 Pre-mRNA splicing factor component Cdc5p/Cef1
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA cdc5l-201 (1)    Ensembl 2786
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM cdc5l No data available
MARKER RELATIONSHIPS
cdc5l Contained in: [BAC] CH73-370H15 (1), CH211-202E13 (1)
cdc5l Encodes: [cDNA] MGC:55853 (1), MGC:192369 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_201084 (1) 2799 bp
Genomic GenBank:BX927095 (1) 211277 bp Blast at MegaBLAST
Polypeptide UniProtKB:E9QIC1 (1) 800 aa
Sequence Information (all 17)
ORTHOLOGY for cdc5l ( Chr: 17 )
CITATIONS (21)