Gene

psmd1

ID

ZDB-GENE-040426-810

Name

proteasome 26S subunit, non-ATPase 1

Symbol

psmd1 Nomenclature History

Previous Names

zgc:55818 (1)

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to enable enzyme regulator activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in membrane. Predicted to be part of proteasome regulatory particle, base subcomplex. Predicted to be active in nucleus and proteasome storage granule. Orthologous to human PSMD1 (proteasome 26S subunit, non-ATPase 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7137372 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With psmd1 Human Ortholog

No data available

Associated With psmd1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR040623	26S proteasome regulatory subunit RPN2, C-terminal
Family	IPR016642	26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
Family	IPR035266	26S Proteasome non-ATPase regulatory subunit 1
Homologous_superfamily	IPR011989	Armadillo-like helical
Homologous_superfamily	IPR016024	Armadillo-type fold
Repeat	IPR002015	Proteasome/cyclosome repeat

Domain Details Per Protein

Protein	Length	26S Proteasome non-ATPase regulatory subunit 1	26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit	26S proteasome regulatory subunit RPN2, C-terminal	Armadillo-like helical	Armadillo-type fold	Proteasome/cyclosome repeat
UniProtKB:F1QY43 InterPro	959
UniProtKB:F1QK93 InterPro	964
UniProtKB:A0A2R8Q718 InterPro	993
UniProtKB:Q7ZVP5 InterPro	887

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	psmd1-203 (1) Ensembl	3069 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	psmd1-002 (1) Ensembl	748 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations