ZFIN ID: ZDB-GENE-040426-779
Gene Name: LSM family member 14B
Gene Symbol: lsm14b    Nomenclature History

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Previous Names: zgc:55673, zRAP55 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Localizes to the cytoplasm. Is expressed in kidney; liver; oocyte stage I; oocyte stage II; and ovary. Orthologous to human LSM14B (LSM family member 14B).
Genome Resources: Alliance (1),  Gene:393140 (1),  Ensembl(GRCz11):ENSDARG00000025386 (1)
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55673]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa45783 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lsm14b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lsm14b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cytoplasm (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR019050 FDF domain
    Domain IPR025609 Lsm14-like, N-terminal
    Domain IPR025761 FFD box
    Domain IPR025762 DFDF domain
    Domain IPR025768 TFG box
    Homologous_superfamily IPR010920 LSM domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lsm14b-201 (1)    Ensembl 1702
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lsm14b No data available
    MARKER RELATIONSHIPS
    lsm14b Contained in: [BAC] DKEYP-44B8 (1)
    lsm14b Encodes: [cDNA] MGC:55673 (1), MGC:174111 (1), MGC:174112 (1), MGC:192641 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200171 (1) 1699 nt
    Genomic GenBank:CR933788 (1) 209245 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q7ZVT0 (1) 382 aa
    Sequence Information (all 23)
    ORTHOLOGY for lsm14b ( Chr: 23 )
    CITATIONS (18)