ZFIN ID: ZDB-GENE-040426-760
Gene Name: adenosylmethionine decarboxylase 1
Gene Symbol: amd1
Sequence Ontology ID : SO:0000704

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Previous Names: fb26e03, si:ch211-257g8.2, wu:fb26e03 (1), zgc:55614 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have adenosylmethionine decarboxylase activity; predicted to be involved in spermidine biosynthetic process and spermine biosynthetic process; predicted to localize to the cytosol;  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55614]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa36945 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH amd1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH amd1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process polyamine biosynthetic process (more)
    Cellular Component cytosol (more)
    Molecular Function adenosylmethionine decarboxylase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001985 (1)
  • InterPro:IPR016067 (1)
  • InterPro:IPR018166 (1)
  • PROSITE:PS01336 (1)
  • Pfam:PF01536 (1)
  • EC:4.1.1.50 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA amd1-002 (1) 697
    mRNA amd1-201 (1) 5230
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM amd1 No data available
    MARKER RELATIONSHIPS
    amd1Contained in: [BAC] CH211-257G8 (order this), DKEY-8O19 (1) (order this)
    amd1Encodes: [EST] fb26e03, fy47d08
    [cDNA] MGC:55614 (1) (order this), MGC:191134 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001161601 (1)
    Genomic GenBank:BX545848 199986bp
    Select Tool
    Polypeptide UniProtKB:Q7ZVU7 (1) 334aa
    Sequence Clusters UniGene:67395 (1)
    Sequence Information (all 18)
    OTHER amd1 GENE PAGES
  • Alliance (1)
  • Gene:792097 (1)
  • VEGA:OTTDARG00000023398 (1)
  • ORTHOLOGY for amd1 (Chr: 20)
    CITATIONS (20)