ZFIN ID: ZDB-GENE-040426-731
Gene Name: bromodomain and PHD finger containing, 1
Gene Symbol: brpf1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:55530 (1)

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Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55530]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b943 Point Mutation Unknown Unknown ENU
t20002 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • t25114 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from Laue et al., 2008
    Observed in:
    DISEASE ASSOCIATED WITH brpf1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Intellectual developmental disorder with dysmorphic facies and ptosis 617333
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process anterior/posterior pattern specification (more)
    Cellular Component nuclear chromatin (more)
    Molecular Function histone binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000313 (1)
  • InterPro:IPR001487 (1)
  • InterPro:IPR001965 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR018359 (1)
  • InterPro:IPR019542 (1)
  • InterPro:IPR019786 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR034732 (1)
  • InterPro:IPR035502 (1)
  • InterPro:IPR036427 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS00633 (1)
  • PROSITE:PS01359 (1)
  • PROSITE:PS50014 (1)
  • PROSITE:PS50016 (1)
  • PROSITE:PS50157 (1)
  • PROSITE:PS50812 (1)
  • PROSITE:PS51805 (1)
  • Pfam:PF00439 (1)
  • Pfam:PF00855 (1)
  • Pfam:PF10513 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM brpf1 No data available
    MARKER RELATIONSHIPS
    brpf1Encodes: [cDNA] MGC:55530 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201016 (1) 3164bp
    Genomic GenBank:CABZ01085599 (1) 4098bp
    Polypeptide UniProtKB:A0A0G2L9X9 (1) 1259aa
    Sequence Clusters UniGene:80481 (1)
    Sequence Information (all 19)
    OTHER brpf1 GENE PAGES
  • Alliance (1)
  • Gene:393991 (1)
  • Ensembl(GRCz11):ENSDARG00000103665 (1)
  • ORTHOLOGY for brpf1 (Chr: 8)
    CITATIONS (24)