ZFIN ID: ZDB-GENE-040426-731
Gene Name: bromodomain and PHD finger containing, 1
Gene Symbol: brpf1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:55530 (1)

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55530]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  ceratobranchial 1 cartilage, ceratobranchial 2 cartilage, ceratobranchial 3 cartilage, ceratobranchial 4 cartilage (all 26) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b943 Point Mutation Unknown Unknown ENU
t20002 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • t25114 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Targeting reagents: MO1-brpf1 (1), MO2-brpf1 (1)
    PHENOTYPE
    Data: 4 figures from Laue et al., 2008
    Observed in: basihyal bone, basihyal cartilage, branchiostegal ray, ceratobranchial bone (all 18) expand
    DISEASE ASSOCIATED WITH brpf1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process anterior/posterior pattern specification (more)
    Cellular Component nuclear chromatin (more)
    Molecular Function histone binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000313 (1)
  • InterPro:IPR001487 (1)
  • InterPro:IPR001965 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR018359 (1)
  • InterPro:IPR019542 (1)
  • InterPro:IPR019786 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR034732 (1)
  • InterPro:IPR035502 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS00633 (1)
  • PROSITE:PS01359 (1)
  • PROSITE:PS50014 (1)
  • PROSITE:PS50016 (1)
  • PROSITE:PS50157 (1)
  • PROSITE:PS50812 (1)
  • PROSITE:PS51805 (1)
  • Pfam:PF00439 (1)
  • Pfam:PF00855 (1)
  • Pfam:PF10513 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM brpf1 No data available
    MARKER RELATIONSHIPS
    brpf1Encodes: [cDNA] MGC:55530 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201016 (1) 3164bp
    Genomic GenBank:CABZ01085599 (1) 4098bp
    Polypeptide UniProtKB:B2YCZ4 (1) 1258aa
    Sequence Clusters UniGene:80481 (1)
    Sequence Information (all 17)
    OTHER brpf1 GENE PAGES
  • Alliance (1)
  • Gene:393991 (1)
  • ORTHOLOGY for brpf1 (Chr: 8)
    CITATIONS (21)