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ZIRC
ZFIN ID: ZDB-GENE-040426-727
Gene Name: ATPase H+ transporting V1 subunit D
Gene Symbol: atp6v1d
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:55524 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have proton-transporting ATPase activity, rotational mechanism. Predicted to localize to the proton-transporting V-type ATPase complex. Orthologous to human ATP6V1D (ATPase H+  ...
GENE EXPRESSION
All Expression Data: 9 figures from 2 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [MGC:55524]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013933Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37172 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atp6v1d HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atp6v1d VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component proton-transporting V-type ATPase complex (more)
    Molecular Function ATPase-coupled transmembrane transporter activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002699 (1)
  • Pfam:PF01813 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp6v1d-201 (1) 2181
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp6v1d No data available
    MARKER RELATIONSHIPS
    atp6v1dContained in: [BAC] CH211-105D18 (1) (order this)
    atp6v1dEncodes: [cDNA] MGC:55524 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001167954 (1)
    Genomic GenBank:AL928824 (1) 189742bp
    Select Tool
    Polypeptide UniProtKB:Q7ZVX8 (1) 248aa
    Sequence Clusters UniGene:14072 (1)
    Sequence Information (all 7)
    ORTHOLOGY for atp6v1d (Chr: 20)
    CITATIONS (26)