ZFIN ID: ZDB-GENE-040426-727
Gene Name: ATPase H+ transporting V1 subunit D
Gene Symbol: atp6v1d    Nomenclature History

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Previous Name: zgc:55524 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have proton-transporting ATPase activity, rotational mechanism. Predicted to localize to proton-transporting V-type ATPase complex. Is expressed in several structures, including blood; epiphysis; liver; mucus secreting cell; and yolk syncytial layer. Orthologous to human ATP6V1D (ATPase H+ transporting V1 subunit D).
Genome Resources: Alliance (1),  Gene:393935 (1),  Ensembl(GRCz11):ENSDARG00000011175 (2)
GENE EXPRESSION
All Expression Data: 9 figures from 2 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [MGC:55524]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013933Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37172 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-atp6v1d N/A 1
    MO2-atp6v1d N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atp6v1d HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atp6v1d VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component proton-transporting V-type ATPase complex (more)
    Molecular Function ATPase-coupled transmembrane transporter activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atp6v1d-201 (1)    Ensembl 2181
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp6v1d No data available
    MARKER RELATIONSHIPS
    atp6v1d Contained in: [BAC] CH211-105D18 (1)
    atp6v1d Encodes: [cDNA] MGC:55524 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001167954 (1)
    Genomic GenBank:AL928824 (1) 189742 nt
    Select Tool
    Polypeptide UniProtKB:Q7ZVX8 (1) 248 aa
    Sequence Information (all 6)
    ORTHOLOGY for atp6v1d ( Chr: 20 )
    CITATIONS (27)