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ZIRC
ZFIN ID: ZDB-GENE-040426-687
Gene Name: staufen double-stranded RNA binding protein 2
Gene Symbol: stau2
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:55287 (1)

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Involved in germ cell development and germ cell migration. Predicted to localize to the microtubule. Is expressed in midbrain; oocyte; and otic vesicle.  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55287]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011012Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014501Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa113 Point Mutation Unknown Premature Stop ENU
    sa24458 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44106 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH stau2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH stau2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process germ cell development (more)
    Cellular Component microtubule (more)
    Molecular Function RNA binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR014720 (1)
  • InterPro:IPR032478 (1)
  • PROSITE:PS50137 (1)
  • Pfam:PF00035 (1)
  • Pfam:PF16482 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA stau2-002 (1) 1448
    mRNA stau2-202 (1) 3252
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM stau2 No data available
    MARKER RELATIONSHIPS
    stau2 Contained in: [BAC] CH211-171B20 (1) (order this), CH211-233I23 (1) (order this), DKEY-11P5 (1) (order this), DKEYP-28D2 (1)
    stau2 Encodes: [cDNA] MGC:55287 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200925 (1) 2220 bp
    Genomic GenBank:CR405710 (1) 185586 bp
    Select Tool
    Polypeptide UniProtKB:F1QJT6 (1) 678 aa
    Sequence Clusters UniGene:75888 (1)
    Sequence Information (all 23)
    ORTHOLOGY for stau2 ( Chr: 24 )
    CITATIONS (27)