ZFIN ID: ZDB-GENE-040426-685
Gene Name: XPA binding protein 2
Gene Symbol: xab2    Nomenclature History

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Previous Names: zgc:63498, zgc:63949 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to be involved in generation of catalytic spliceosome for first transesterification step. Predicted to localize to Prp19 complex; U2-type catalytic step 2 spliceosome; and post-mRNA release spliceosomal complex. Orthologous to human XAB2 (XPA binding protein 2).
Genome Resources: Alliance (1),  Gene:387600 (1),  Ensembl(GRCz11):ENSDARG00000007092 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63498]
  1 figure (1 image) from Thisse et al., 2004 [MGC:63949]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH xab2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH xab2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process RNA processing (more)
Cellular Component post-mRNA release spliceosomal complex (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA xab2-201 (1)    Ensembl 2903
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM xab2 No data available
MARKER RELATIONSHIPS
xab2 Contained in: [BAC] DKEY-209E8 (1) (order this)
xab2 Encodes: [cDNA] MGC:63498, MGC:63949 (1), MGC:198247 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001044783 (1)
Genomic GenBank:BX005479 (1) 171793 nt
Select Tool
Polypeptide UniProtKB:Q1LY92 (1) 851 aa
Sequence Information (all 18)
ORTHOLOGY for xab2 ( Chr: 3 )
CITATIONS (22)