ZFIN ID: ZDB-GENE-040426-2928
Gene Name: immunoglobulin (CD79A) binding protein 1
Gene Symbol: igbp1    Nomenclature History

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Previous Names: fi33h08, wu:fi33h08, zgc:55347

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have protein phosphatase 2A binding activity. Predicted to be involved in regulation of dephosphorylation. Predicted to localize to cytosol. Human ortholog(s) of this gene implicated in corpus callosum agenesis-intellectual disability-coloboma-micrognathia syndrome. Orthologous to human IGBP1 (immunoglobulin binding protein 1).
Genome Resources: Alliance (1),  Gene:406843 (1),  Ensembl(GRCz11):ENSDARG00000002184 (1)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55347]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14903 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20473 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH igbp1 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    corpus callosum agenesis-intellectual disability-coloboma-micrognathia syndrome Alliance Corpus callosum, agenesis of, with mental retardation, ocular coloboma and micrognathia 300472
    DISEASE ASSOCIATED WITH igbp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of signal transduction (more)
    Cellular Component cytosol (more)
    Molecular Function protein phosphatase 2A binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA igbp1-201 (1)    Ensembl 2385
    ncRNA igbp1-002 (1)    Ensembl 747
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM igbp1 No data available
    MARKER RELATIONSHIPS
    igbp1 Contained in: [BAC] CH73-223D24 (1)
    igbp1 Encodes: [EST] fi33h08
    [cDNA] MGC:55347 (1), MGC:192416 (1)
    igbp1 Has Artifact: [EST] fc70b08
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213522 (1) 2360 nt
    Genomic GenBank:CU571324 (1) 78830 nt
    Select Tool
    Polypeptide UniProtKB:B8JM93 (1) 355 aa
    Sequence Information (all 16)
    ORTHOLOGY for igbp1 ( Chr: 5 )
    CITATIONS (22)