ZFIN ID: ZDB-GENE-040426-2920
Gene Name: ring finger protein 41
Gene Symbol: rnf41    Nomenclature History

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Previous Names: wu:fi13f07, wu:fi25b06, zgc:55389 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have ubiquitin protein ligase activity. Involved in melanocyte differentiation. Predicted to localize to endoplasmic reticulum tubular network. Is expressed in several structures, including germ ring; muscle; nervous system; neural crest; and optic cup. Orthologous to human RNF41 (ring finger protein 41).
Genome Resources: Alliance (1),  Gene:406837 (1),  Ensembl(GRCz11):ENSDARG00000036831 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011737Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37757 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-rnf41 N/A 1
    PHENOTYPE
    Data: Fig. 3 from Maddirevula et al., 2011
    Observed in:
    DISEASE ASSOCIATED WITH rnf41 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rnf41 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process melanocyte differentiation (more)
    Cellular Component endoplasmic reticulum tubular network (more)
    Molecular Function ubiquitin-protein transferase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rnf41-201 (1)    Ensembl 3881
    ncRNA rnf41-002 (1)    Ensembl 656
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rnf41 No data available
    MARKER RELATIONSHIPS
    rnf41 Contained in: [BAC] CH211-66I15 (1)
    rnf41 Encodes: [EST] fi13f07 (1), fi25b06 (1)
    [cDNA] MGC:55389 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213516 (1) 3901 nt
    Genomic GenBank:BX957355 (1) 155581 nt
    Select Tool
    Polypeptide UniProtKB:F1QIM8 (1) 318 aa
    Sequence Information (all 14)
    ORTHOLOGY for rnf41 ( Chr: 23 )
    CITATIONS (23)