Gene

ddx39ab

ID
ZDB-GENE-040426-2902
Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
Symbol
ddx39ab Nomenclature History
Previous Names
  • ddx39
  • ddx39b
  • fc16a02
  • wu:fc16a02
  • zgc:55433
  • zgc:85646
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Exhibits RNA binding activity. Involved in histone H3-K4 methylation and mRNA splicing, via spliceosome. Is expressed in several structures, including eye; heart tube; immature eye; liver; and trunk musculature. Orthologous to human DDX39A (DExD-box helicase 39A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
7 figures from Zhang et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ddx39ab Human Ortholog
No data available
Associated With ddx39ab Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001650 Helicase, C-terminal
Domain IPR011545 DEAD/DEAH box helicase domain
Domain IPR014001 Helicase superfamily 1/2, ATP-binding domain
Domain IPR014014 RNA helicase, DEAD-box type, Q motif
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length DEAD/DEAH box helicase domain Helicase, C-terminal Helicase superfamily 1/2, ATP-binding domain P-loop containing nucleoside triphosphate hydrolase RNA helicase, DEAD-box type, Q motif
UniProtKB:F6NVB9 428
UniProtKB:Q803W0 427
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations