ZFIN ID: ZDB-GENE-040426-2877
Gene Name: actin related protein 5
Gene Symbol: actr5    Nomenclature History

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Previous Names: wu:fi39h10, zgc:63743 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to be involved in ATP-dependent chromatin remodeling; double-strand break repair; and regulation of transcription, DNA-templated. Predicted to localize to Ino80 complex and cytoplasm. Orthologous to human ACTR5 (actin related protein 5).
Genome Resources: Alliance (1),  Gene:406809 (1),  Ensembl(GRCz11):ENSDARG00000098235 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63743]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21407 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-actr5 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH actr5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH actr5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ATP-dependent chromatin remodeling (more)
    Cellular Component cytoplasm (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA actr5-201 (1)    Ensembl 1994
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM actr5 No data available
    MARKER RELATIONSHIPS
    actr5 Contained in: [BAC] DKEY-11F4 (1) (order this)
    actr5 Encodes: [EST] fi39h10 (1)
    [cDNA] MGC:63743 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213488 (1) 1948 nt
    Genomic GenBank:CR753874 (1) 177524 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IDJ2 (1) 592 aa
    Sequence Information (all 11)
    ORTHOLOGY for actr5 ( Chr: 9 )
    CITATIONS (18)