ZFIN ID: ZDB-GENE-040426-2876
Gene Name: pitrilysin metallopeptidase 1
Gene Symbol: pitrm1
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fa03d09, zgc:55469 (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metalloendopeptidase activity; predicted to be involved in proteolysis; predicted to localize to the mitochondrial matrix; orthologous to human PITRM1 (pitrilysin metallopeptidase  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55469]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa25120 Point Mutation Unknown Splice Site ENU
sa25121 Point Mutation Unknown Splice Site ENU
sa31298 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33024 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pitrm1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pitrm1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Cellular Component mitochondrial matrix (more)
    Molecular Function metalloendopeptidase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007863 (1)
  • InterPro:IPR011249 (1)
  • InterPro:IPR011765 (1)
  • InterPro:IPR013578 (1)
  • Pfam:PF00675 (1)
  • Pfam:PF05193 (1)
  • Pfam:PF08367 (1)
  • EC:3.4.24.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pitrm1-001 (1) 3535
    ncRNA pitrm1-002 (1) 1067
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM pitrm1 No data available
    MARKER RELATIONSHIPS
    pitrm1Contained in: [BAC] DKEYP-12A9 (1)
    pitrm1Encodes: [EST] fa03d09 (1)
    [cDNA] MGC:55469 (1) (order this), MGC:193031 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213487 (1) 3408bp
    Genomic GenBank:BX677676 (1) 169301bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QU26 (1) 1023aa
    Sequence Clusters UniGene:75315 (1)
    Sequence Information (all 20)
    OTHER pitrm1 GENE PAGES
  • Alliance (1)
  • Gene:406808 (1)
  • VEGA:OTTDARG00000025177 (1)
  • ORTHOLOGY for pitrm1 (Chr: 2)
    CITATIONS (21)