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ZIRC
ZFIN ID: ZDB-GENE-040426-2849
Gene Name: RAB6A, member RAS oncogene family
Gene Symbol: rab6a
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: fb43c01, wu:fb43c01, zgc:55788

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTP binding activity and GTPase activity. Orthologous to several human genes including RAB6A (RAB6A, member RAS oncogene family).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55788]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rab6a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rab6a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function GTPase activity (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001806 (1)
  • InterPro:IPR005225 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00071 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rab6a-003 (1) 616
    rab6a-004 (1) 751
    mRNA rab6a-203 (1) 4092
    rab6a-204 (1) 2961
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rab6a No data available
    MARKER RELATIONSHIPS
    rab6a Contained in: [BAC] CH211-176G13 (1) (order this), CH211-183B15 (1) (order this)
    rab6a Encodes: [EST] fb43c01
    [cDNA] MGC:55788 (1) (order this), MGC:174132 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_214765 (1) 1993 bp
    Genomic GenBank:CU694807 (1) 154979 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IH39 (1) 208 aa
    Sequence Clusters UniGene:107857 (1)
    Sequence Information (all 26)
    ORTHOLOGY for rab6a ( Chr: 10 )
    CITATIONS (20)