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ZIRC
ZFIN ID: ZDB-GENE-040426-2831
Gene Name: sideroflexin 2
Gene Symbol: sfxn2
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fa03a09, zgc:55508, zgc:77081

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ion transmembrane transporter activity. Predicted to be involved in ion transport and transmembrane transport. Predicted to localize to the integral component of membrane and  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55508]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la018229Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sfxn2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sfxn2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ion transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ion transmembrane transporter activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004686 (1)
  • Pfam:PF03820 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA sfxn2-003 (1) 1380
    mRNA sfxn2-201 (1) 2092
    aberrant processed transcript sfxn2-202 (1) 529
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sfxn2 No data available
    MARKER RELATIONSHIPS
    sfxn2Contained in: [BAC] CH211-208D15 (1) (order this), CH211-244C18 (1) (order this)
    sfxn2Encodes: [EST] fa03a09 (1)
    [cDNA] MGC:55508 (1) (order this), MGC:77081 (1) (order this), MGC:113993 (order this), MGC:173571 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212730 (1) 2018bp
    Genomic GenBank:AL928692 215891bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q1MTE6 (1) 321aa
    Sequence Clusters UniGene:11588 (1)
    Sequence Information (all 38)
    ORTHOLOGY for sfxn2 (Chr: 12)
    CITATIONS (24)