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ZIRC
ZFIN ID: ZDB-GENE-040426-2817
Gene Name: CWC25 spliceosome associated protein homolog
Gene Symbol: cwc25
Sequence Ontology ID : SO:0000704

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Previous Names: ccdc49, fc11a02, flj20291l (1), im:7140273, pate, pte, wu:fc11a02 (1), zgc:55552

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human CWC25 (CWC25 spliceosome associated protein homolog).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7140273]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1858aTg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la023785Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 3 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH cwc25 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cwc25 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019339 (1)
  • InterPro:IPR022209 (1)
  • Pfam:PF10197 (1)
  • Pfam:PF12542 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cwc25-201 (1) 1937
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cwc25 No data available
    MARKER RELATIONSHIPS
    cwc25Contained in: [BAC] CH211-232H16 (1) (order this)
    cwc25Encodes: [EST] fc11a02, IMAGE:7140273 (1) (order this)
    [cDNA] MGC:55552 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213462 (1) 1934bp
    Genomic GenBank:BX120016 (1) 158139bp
    Select Tool
    Polypeptide UniProtKB:Q7ZVW8 (1) 393aa
    Sequence Clusters UniGene:38328 (1)
    Sequence Information (all 16)
    ORTHOLOGY for cwc25 (Chr: 2)
    CITATIONS (25)