ZFIN ID: ZDB-GENE-040426-2804
Gene Name: ATPase type 13A
Gene Symbol: atp13a
Previous Names: hm:zehn0386, wu:fi75c10, zgc:63781
Location: Chr: 3   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63781]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa13862, sa20141
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cation transport (more)
Cellular Component integral component of membrane (more)
Molecular Function ATP binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001757 (1)
  • InterPro:IPR006544 (1)
  • InterPro:IPR008250 (1)
  • InterPro:IPR018303 (1)
  • InterPro:IPR023214 (1)
  • InterPro:IPR023299 (1)
  • PROSITE:PS00154 (1)
  • Pfam:PF00122 (1)
  • Pfam:PF00702 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp13a-001 (1) 4083
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp13a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp13a Contained in: [BAC] CH211-220A2 (1) (order this), DKEY-189E16 (1)
    atp13a Encodes: [EST] fi75c10 (1), zehn0386 (1)
    [cDNA] MGC:63781 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001001403 (1) 4083 bp
    Genomic GenBank:CT573476 (1) 195160 bp
    Select Tool
    Polypeptide UniProtKB:F1R1X4 (1) 1242 aa
    Sequence Clusters UniGene:78072 (1)
    Sequence Information (all 14)
    OTHER atp13a GENE PAGES
  • Gene:334466 (1)
  • VEGA:OTTDARG00000027119 (1)
  • Ensembl(Zv9):ENSDARG00000029931 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish atp13a 3  
    Human ATP13A1 19 (19p13.11)
  • Gene:57130
  • Orthology Details
    CITATIONS (15)