ZFIN ID: ZDB-GENE-040426-2768
Gene Name: CD9 molecule b
Gene Symbol: cd9b
Sequence Ontology ID : SO:0000704

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Previous Names: cd9l, fb82b11, wu:fb82b11, zgc:56512

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (11 images) from Thisse et al., 2004 [MGC:56512]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010118Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 2 figures from Gallardo et al., 2010
    Observed in:
    DISEASE ASSOCIATED WITH cd9b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cd9b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process posterior lateral line development (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000301 (1)
  • InterPro:IPR008952 (1)
  • InterPro:IPR018499 (1)
  • InterPro:IPR018503 (1)
  • PROSITE:PS00421 (1)
  • Pfam:PF00335 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cd9b-001 (1) 1125
    cd9b-002 (1) 859
    cd9b-003 (1) 817
    cd9b-004 (1) 934
    ncRNA cd9b-005 (1) 786
    mRNA cd9b-006 (1) 739
    cd9b-007 (1) 711
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cd9b No data available
    MARKER RELATIONSHIPS
    cd9bContained in: [BAC] DKEY-224K5 (1) (order this)
    cd9bEncodes: [EST] fb82b11
    [cDNA] MGC:56512 (1) (order this), MGC:86758 (1) (order this)
    cd9bIs Hybridized by: [EST] fb13e10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213428 (1) 1143bp
    Genomic GenBank:CR293509 (1) 143625bp
    Select Tool
    Polypeptide UniProtKB:Q1L9G6 (1) 231aa
    Sequence Clusters UniGene:50843 (1)
    Sequence Information (all 25)
    OTHER cd9b GENE PAGES
  • Alliance (1)
  • Gene:406737 (1)
  • VEGA:OTTDARG00000014535 (1)
  • Ensembl(GRCz11):ENSDARG00000016691 (2)
  • ORTHOLOGY for cd9b (Chr: 4)
    CITATIONS (29)