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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2738
Gene Name: RAP1A, member of RAS oncogene family b
Gene Symbol: rap1ab    Nomenclature History

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Previous Names: Rap1a (1), zgc:56630 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have GDP binding activity; GTP binding activity; and GTPase activity. Involved in convergent extension involved in gastrulation and embryonic cranial skeleton morphogenesis. Predicted to localize to the plasma membrane. Orthologous to human RAP1A (RAP1A, member of RAS oncogene family).
Genome Resources: Alliance (1),  Gene:406714 (1),  Ensembl(GRCz11):ENSDARG00000087346 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56630]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-rap1ab
2
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rap1ab HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rap1ab VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process convergent extension involved in gastrulation (more)
Cellular Component membrane (more)
Molecular Function GTPase activity (more)
GO Terms (all 12)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA rap1ab-201 (1)    Ensembl 1880
rap1ab-203 (1)    Ensembl 645
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM rap1ab No data available
MARKER RELATIONSHIPS
rap1ab Contained in: [BAC] CH73-92C7 (1) (order this)
rap1ab Encodes: [cDNA] MGC:56630 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_213405 (1) 1822 bp
Genomic GenBank:FP003590 (1) 110482 bp
Select Tool
Polypeptide UniProtKB:E7FBI4 (1) 185 aa
Sequence Clusters UniGene:77820 (1)
Sequence Information (all 19)
ORTHOLOGY for rap1ab ( Chr: 11 )
CITATIONS (20)