ZFIN ID: ZDB-GENE-040426-2701
Gene Name: ribosomal protein S11
Gene Symbol: rps11
Sequence Ontology ID : SO:0000704

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Previous Names: 40S (1), wu:fa91c09, wu:fb34b11, zgc:56293

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of ribosome; predicted to be involved in translation; predicted to localize to the cytosolic small ribosomal subunit; orthologous to human RPS11 (ribosomal  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56293]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi2799Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 3 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH rps11 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rps11 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Cellular Component ribosome (more)
    Molecular Function structural constituent of ribosome (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000266 (1)
  • InterPro:IPR012340 (1)
  • InterPro:IPR019979 (1)
  • InterPro:IPR028333 (1)
  • InterPro:IPR032440 (1)
  • PROSITE:PS00056 (1)
  • Pfam:PF00366 (1)
  • Pfam:PF16205 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rps11-001 (1) 616
    ncRNA rps11-002 (1) 812
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rps11 No data available
    MARKER RELATIONSHIPS
    rps11Contained in: [BAC] DKEY-260C8 (1) (order this)
    rps11Contains: [SNP] rs3728164 (1), rs3728165 (1)
    rps11Encodes: [EST] fa91c09 (1), fb34b11 (1)
    [cDNA] MGC:56293 (1) (order this), MGC:174092 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213377 (1) 593bp
    Genomic GenBank:CR388062 (1) 153088bp
    Select Tool
    Polypeptide UniProtKB:Q6DRF7 (1) 159aa
    Sequence Clusters UniGene:75616 (1)
    Sequence Information (all 20)
    OTHER rps11 GENE PAGES
  • Alliance (1)
  • Gene:406686 (1)
  • VEGA:OTTDARG00000027247 (1)
  • Ensembl(GRCz11):ENSDARG00000053058 (2)
  • ORTHOLOGY for rps11 (Chr: 3)
    CITATIONS (50)