ZFIN ID: ZDB-GENE-040426-2701
Gene Name: ribosomal protein S11
Gene Symbol: rps11    Nomenclature History

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Previous Names: 40S (1), wu:fa91c09, wu:fb34b11, zgc:56293

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to localize to cytosolic small ribosomal subunit. Orthologous to human RPS11 (ribosomal protein S11).
Genome Resources: Alliance (1),  Gene:406686 (1),  Ensembl(GRCz11):ENSDARG00000053058 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56293]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi2799Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH rps11 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rps11 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Cellular Component ribosome (more)
    Molecular Function structural constituent of ribosome (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rps11-201 (1)    Ensembl 616
    ncRNA rps11-002 (1)    Ensembl 812
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rps11 No data available
    MARKER RELATIONSHIPS
    rps11 Contained in: [BAC] DKEY-260C8 (1) (order this)
    rps11 Contains: [SNP] rs3728164 (1), rs3728165 (1)
    rps11 Encodes: [EST] fa91c09 (1), fb34b11 (1)
    [cDNA] MGC:56293 (1), MGC:174092 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213377 (1) 593 nt
    Genomic GenBank:CR388062 (1) 153088 nt
    Select Tool
    Polypeptide UniProtKB:Q6DRF7 (1) 159 aa
    Sequence Information (all 19)
    ORTHOLOGY for rps11 ( Chr: 3 )
    CITATIONS (57)