ZFIN ID: ZDB-GENE-040426-2647
Gene Name: SAFB-like, transcription modulator
Gene Symbol: sltm    Nomenclature History

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Previous Names: wu:fd12b08, zgc:65985

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have sequence-specific DNA binding activity. Predicted to be involved in regulation of mRNA processing and regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human SLTM (SAFB like transcription modulator).
Genome Resources: Alliance (1),  Gene:406642 (1),  Ensembl(GRCz11):ENSDARG00000052728 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH sltm HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sltm VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ribosome biogenesis (more)
Cellular Component nucleus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
aberrant processed transcript sltm-204 (1)    Ensembl 595
mRNA sltm-203 (1)    Ensembl 805
sltm-205 (1)    Ensembl 449
sltm-207 (1)    Ensembl 9342
ncRNA sltm-004 (1)    Ensembl 445
sltm-005 (1)    Ensembl 1290
sltm-007 (1)    Ensembl 740
sltm-008 (1) 680
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM sltm No data available
MARKER RELATIONSHIPS
sltm Contained in: [BAC] CH211-162M14 (1)
sltm Encodes: [EST] fd12b08 (1)
[cDNA] MGC:65985 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_213333 (1) 2033 nt
Genomic GenBank:AL935053 (1) 138341 nt
Select Tool
Polypeptide UniProtKB:F1Q6F9 (1) 983 aa
Sequence Information (all 20)
ORTHOLOGY for sltm ( Chr: 7 )
CITATIONS (23)