ZFIN ID: ZDB-GENE-040426-2600
Gene Name: charged multivesicular body protein 3
Gene Symbol: chmp3    Nomenclature History

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Previous Names: fb47g01, vps24, wu:fb47g01, zgc:76972

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to be involved in endosome transport via multivesicular body sorting pathway; late endosome to vacuole transport; and protein transport. Predicted to localize to ESCRT III complex and multivesicular body. Orthologous to several human genes including RNF103-CHMP3 (RNF103-CHMP3 readthrough).
Genome Resources: Alliance (1),  Gene:406621 (1),  Ensembl(GRCz11):ENSDARG00000038064 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH chmp3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH chmp3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein transport (more)
Cellular Component cytoplasm (more)
Molecular Function molecular_function (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA chmp3-201 (1)    Ensembl 1418
ncRNA chmp3-002 (1)    Ensembl 785
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM chmp3 No data available
MARKER RELATIONSHIPS
chmp3 Contained in: [BAC] DKEY-21A6 (order this)
chmp3 Encodes: [EST] fb47g01
[cDNA] MGC:76972 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_213320 (1) 1420 nt
Genomic GenBank:CR405694 (1) 207188 nt Blast at MegaBLAST
Polypeptide UniProtKB:Q6NY88 (1) 221 aa
Sequence Information (all 11)
ORTHOLOGY for chmp3 ( Chr: 17 )
CITATIONS (22)