ZFIN ID: ZDB-GENE-040426-2587
Gene Name: interferon regulatory factor 5
Gene Symbol: irf5
Sequence Ontology ID : SO:0000704

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Previous Names: im:7155364, zgc:76986

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding activity transcription factor activity and transcription regulatory region DNA binding activity; predicted to be involved in several processes, including  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7155364]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH irf5 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
inflammatory bowel disease 14 {Inflammatory bowel disease 14} 612245
{Systemic lupus erythematosus, susceptibility to, 10} 612251
DISEASE ASSOCIATED WITH irf5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cytokine-mediated signaling pathway (more)
Molecular Function DNA-binding transcription factor activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001346 (1)
  • InterPro:IPR008984 (1)
  • InterPro:IPR017855 (1)
  • InterPro:IPR019471 (1)
  • InterPro:IPR019817 (1)
  • InterPro:IPR029838 (1)
  • InterPro:IPR036388 (1)
  • InterPro:IPR036390 (1)
  • PROSITE:PS00601 (1)
  • PROSITE:PS51507 (1)
  • Pfam:PF00605 (1)
  • Pfam:PF10401 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA irf5-003 (1) 2536
    mRNA irf5-201 (1) 1551
    irf5-204 (1) 548
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM irf5 No data available
    MARKER RELATIONSHIPS
    irf5Contained in: [BAC] CH211-266A5 (1) (order this)
    irf5Encodes: [EST] IMAGE:7155364 (1) (order this)
    [cDNA] MGC:76986 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212875 (1) 2560bp
    Genomic GenBank:BX465210 (1) 171708bp
    Select Tool
    Polypeptide UniProtKB:B0S682 (1) 516aa
    Sequence Clusters UniGene:7758 (1)
    Sequence Information (all 16)
    OTHER irf5 GENE PAGES
  • Alliance (1)
  • Gene:405811 (1)
  • VEGA:OTTDARG00000007811 (1)
  • Ensembl(GRCz11):ENSDARG00000045681 (2)
  • ORTHOLOGY for irf5 (Chr: 4)
    CITATIONS (27)