ZFIN ID: ZDB-GENE-040426-2544
Gene Name: PDZ domain containing 11
Gene Symbol: pdzd11    Nomenclature History

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Previous Name: zgc:77536 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have protein C-terminus binding activity. Predicted to be involved in maintenance of epithelial cell apical/basal polarity; neurotransmitter secretion; and protein localization to basolateral plasma membrane. Predicted to localize to several cellular components, including basolateral plasma membrane; cell-cell junction; and cytosol. Orthologous to human PDZD11 (PDZ domain containing 11).
Genome Resources: Alliance (1),  Gene:405893 (1),  Ensembl(GRCz11):ENSDARG00000053194 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7152485]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pdzd11 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pdzd11 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process maintenance of epithelial cell apical/basal polarity (more)
Cellular Component basolateral plasma membrane (more)
Molecular Function protein C-terminus binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pdzd11-201 (1)    Ensembl 1486
pdzd11-202 (1)    Ensembl 1216
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pdzd11 No data available
MARKER RELATIONSHIPS
pdzd11 Contained in: [BAC] DKEY-31J3 (1) (order this)
pdzd11 Encodes: [EST] IMAGE:7152485 (1)
[cDNA] MGC:77536 (1), MGC:172117 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_212957 (1) 1199 nt
Genomic GenBank:BX571981 (1) 258091 nt Blast at MegaBLAST
Polypeptide UniProtKB:A8WG12 (1) 142 aa
Sequence Information (all 15)
ORTHOLOGY for pdzd11 ( Chr: 14 )
CITATIONS (19)