ZFIN ID: ZDB-GENE-040426-2467
Gene Name: propionyl-CoA carboxylase subunit beta
Gene Symbol: pccb
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:85813

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Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6893522]
  6 figures (5 images) from Thisse et al., 2004 [IMAGE:7148931]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10683 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19760 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pccb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    propionic acidemia Propionicacidemia 606054
    DISEASE ASSOCIATED WITH pccb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process fatty acid catabolic process (more)
    Molecular Function ligase activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011762 (1)
  • InterPro:IPR011763 (1)
  • InterPro:IPR029045 (1)
  • InterPro:IPR034733 (1)
  • PROSITE:PS50980 (1)
  • PROSITE:PS50989 (1)
  • Pfam:PF01039 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pccb-001 (1) 2228
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pccb No data available
    MARKER RELATIONSHIPS
    pccbContained in: [BAC] DKEY-223D7 (1) (order this)
    pccbEncodes: [EST] IMAGE:6893522 (1) (order this), IMAGE:7148931 (1) (order this)
    [cDNA] MGC:85813 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212925 (1) 1846bp
    Genomic GenBank:CR786576 (1) 202469bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6NWC8 (1) 557aa
    Sequence Clusters UniGene:82447 (1)
    Sequence Information (all 15)
    OTHER pccb GENE PAGES
  • Alliance (1)
  • Gene:405861 (1)
  • VEGA:OTTDARG00000019738 (1)
  • Ensembl(GRCz11):ENSDARG00000038910 (2)
  • ORTHOLOGY for pccb (Chr: 2)
    CITATIONS (21)