ZFIN ID: ZDB-GENE-040426-2460
Gene Name: zgc:85932
Gene Symbol: zgc:85932    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to localize to the cytoplasm.
Genome Resources: Alliance (1),  Gene:405875 (1),  Ensembl(GRCz11):ENSDARG00000098239 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:85932]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11591 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:85932 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:85932 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Cellular Component cytoplasm (more)
    Molecular Function calcium-dependent cysteine-type endopeptidase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Active_site IPR000169 Cysteine peptidase, cysteine active site
    Binding_site IPR018247 EF-Hand 1, calcium-binding site
    Domain IPR001300 Peptidase C2, calpain, catalytic domain
    Domain IPR002048 EF-hand domain
    Domain IPR022682 Peptidase C2, calpain, large subunit, domain III
    Domain IPR022683 Peptidase C2, calpain, domain III
    Family IPR022684 Peptidase C2, calpain family
    Homologous_superfamily IPR011992 EF-hand domain pair
    Homologous_superfamily IPR036213 Calpain large subunit, domain III superfamily
    Homologous_superfamily IPR038765 Papain-like cysteine peptidase superfamily
    TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:85932 No data available
    MARKER RELATIONSHIPS
    zgc:85932 Encodes: [cDNA] MGC:85932 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_212939 (1)
    Genomic GenBank:CABZ01102128 (1) 37557 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IX46 (1) 671 aa
    Sequence Information (all 27)
    ORTHOLOGY for zgc:85932 ( Chr: 15 )
    CITATIONS (15)