ZFIN ID: ZDB-GENE-040426-2401
Gene Name: poly(A) binding protein, nuclear 1
Gene Symbol: pabpn1
Sequence Ontology ID : SO:0000704

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Previous Names: fb19c03, wu:fb17e03, wu:fb18c06, wu:fb19c03, zgc:85979, zgc:92452

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity; predicted to be involved in positive regulation of polynucleotide adenylyltransferase activity; orthologous to several human genes including PABPN1 (poly(A)  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:85979]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pabpn1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
oculopharyngeal muscular dystrophy Oculopharyngeal muscular dystrophy 164300
DISEASE ASSOCIATED WITH pabpn1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of polynucleotide adenylyltransferase activity (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR034911 (1)
  • InterPro:IPR035979 (1)
  • PROSITE:PS50102 (1)
  • Pfam:PF00076 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pabpn1-201 (1) 1737
    pabpn1-203 (1) 2289
    pabpn1-204 (1) 843
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pabpn1 No data available
    MARKER RELATIONSHIPS
    pabpn1Contained in: [BAC] DKEYP-73G8 (1)
    pabpn1Encodes: [EST] fb17e03 (1), fb18c06 (1), fb19c03
    [cDNA] MGC:85979 (1) (order this), MGC:92452 (1) (order this), MGC:171884 (1) (order this), MGC:173800 (1) (order this), MGC:191819 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001105132 (1) 2669bp
    Genomic GenBank:BX294113 (1) 199820bp
    Select Tool
    Polypeptide UniProtKB:Q6NUT4 (1) 284aa
    Sequence Clusters UniGene:76617 (1)
    Sequence Information (all 35)
    OTHER pabpn1 GENE PAGES
  • Alliance (1)
  • Gene:406543 (1)
  • VEGA:OTTDARG00000022496 (1)
  • Ensembl(GRCz11):ENSDARG00000045373 (2)
  • ORTHOLOGY for pabpn1 (Chr: 24)
    CITATIONS (20)