ZFIN ID: ZDB-GENE-040426-2401
Gene Name: poly(A) binding protein, nuclear 1
Gene Symbol: pabpn1    Nomenclature History

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Previous Names: fb19c03, wu:fb17e03, wu:fb18c06, wu:fb19c03, zgc:85979, zgc:92452

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Human ortholog(s) of this gene implicated in oculopharyngeal muscular dystrophy. Orthologous to human PABPN1 (poly(A) binding protein nuclear 1).
Genome Resources: Alliance (1),  Gene:406543 (1),  Ensembl(GRCz11):ENSDARG00000045373 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:85979]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pabpn1 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
oculopharyngeal muscular dystrophy Alliance Oculopharyngeal muscular dystrophy 164300
DISEASE ASSOCIATED WITH pabpn1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function nucleic acid binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pabpn1-201 (1)    Ensembl 1737
pabpn1-203 (1)    Ensembl 2289
pabpn1-204 (1)    Ensembl 843
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pabpn1 No data available
MARKER RELATIONSHIPS
pabpn1 Contained in: [BAC] DKEYP-73G8 (1)
pabpn1 Encodes: [EST] fb17e03 (1), fb18c06 (1), fb19c03
[cDNA] MGC:85979 (1), MGC:92452 (1), MGC:171884 (1), MGC:173800 (1), MGC:191819 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001105132 (1) 2669 nt
Genomic GenBank:BX294113 (1) 199820 nt
Select Tool
Polypeptide UniProtKB:Q6NUT4 (1) 284 aa
Sequence Information (all 34)
ORTHOLOGY for pabpn1 ( Chr: 24 )
CITATIONS (22)