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ZIRC
ZFIN ID: ZDB-GENE-040426-2361
Gene Name: RELT TNF receptor
Gene Symbol: relt    Nomenclature History

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Previous Name: zgc:77246 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to localize to the integral component of membrane. Human ortholog(s) of this gene implicated in amelogenesis imperfecta. Is expressed in Kupffer's vesicle and axis. Orthologous to human RELT (RELT TNF receptor).
Genome Resources: Alliance (1),  Gene:404605 (1),  Ensembl(GRCz11):ENSDARG00000099724 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2004 [MGC:77246]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Segmentation:14-19 somites (16.0h-19.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23202 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH relt HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Amelogenesis imperfecta, type IIIC 618386
    DISEASE ASSOCIATED WITH relt VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR022248 (1)
  • InterPro:IPR022333 (1)
  • InterPro:IPR034048 (1)
  • Pfam:PF12606 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA relt-201 (1)    Ensembl 1909
    relt-202 (1)    Ensembl 441
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM relt No data available
    MARKER RELATIONSHIPS
    relt Contained in: [BAC] CH211-173L10 (1) (order this), CH211-248G20 (1) (order this)
    relt Encodes: [cDNA] MGC:77246 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_207073 (1) 1740 bp
    Genomic GenBank:BX323823 162039 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IG80 (1) 401 aa
    Sequence Clusters UniGene:83234 (1)
    Sequence Information (all 14)
    ORTHOLOGY for relt ( Chr: 18 )
    CITATIONS (17)