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ZIRC
ZFIN ID: ZDB-GENE-040426-2359
Gene Name: zinc finger CCCH-type containing 10
Gene Symbol: zc3h10
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:77248

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Predicted to be involved in regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to the cytoplasm and nucleoplasm. Orthologous to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:77248]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029249Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20821 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zc3h10 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zc3h10 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of alternative mRNA splicing, via spliceosome (more)
    Cellular Component cytoplasm (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000571 (1)
  • InterPro:IPR036855 (1)
  • PROSITE:PS50103 (1)
  • Pfam:PF00642 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zc3h10-201 (1) 2310
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zc3h10 No data available
    MARKER RELATIONSHIPS
    zc3h10 Contained in: [BAC] CH211-239J9 (order this)
    zc3h10 Encodes: [cDNA] MGC:77248 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_207098 (1) 2240 bp
    Genomic GenBank:AL929108 (1) 161277 bp
    Select Tool
    Polypeptide UniProtKB:Q6ZM22 (1) 541 aa
    Sequence Clusters UniGene:19352 (1)
    Sequence Information (all 9)
    ORTHOLOGY for zc3h10 ( Chr: 6 )
    CITATIONS (20)