header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2308
Gene Name: SIX homeobox 1b
Gene Symbol: six1b
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: six1 (1), six1a (1), zgc:77345 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and transcription regulatory region sequence-specific DNA binding activity. Involved in several processes,  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fr15 Point Mutation Unknown Stop Loss ENU
fr16 Point Mutation Unknown Unknown
oz1 Small Deletion Unknown Unknown TALEN
oz34 Small Deletion Unknown Unknown CRISPR
sa10473 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH six1b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal dominant nonsyndromic deafness 23 Deafness, autosomal dominant 23 605192
    branchiootic syndrome Branchiootic syndrome 3 608389
    DISEASE ASSOCIATED WITH six1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process adenohypophysis development (more)
    Cellular Component cytoplasm (more)
    Molecular Function DNA binding (more)
    GO Terms (all 22)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA six1b-201 (1) 5417
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM six1b
    MARKER RELATIONSHIPS
    six1b Contained in: [BAC] DKEY-225H23 (1) (order this)
    six1b Encodes: [cDNA] MGC:77345 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_207095 (1) 1276 bp
    Genomic GenBank:BX649231 (1) 153569 bp
    Select Tool
    Polypeptide UniProtKB:Q6NZ04 (1) 284 aa
    Sequence Clusters UniGene:27681 (1)
    Sequence Information (all 19)
    ORTHOLOGY for six1b ( Chr: 20 )
    CITATIONS (44)