ZFIN is now using GRCz12tu for Genomic Data
Gene
map1lc3a
- ID
- ZDB-GENE-040426-2232
- Name
- microtubule-associated protein 1 light chain 3 alpha
- Symbol
- map1lc3a Nomenclature History
- Previous Names
-
- zgc:77094
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable microtubule binding activity; phosphatidylethanolamine binding activity; and ubiquitin protein ligase binding activity. Predicted to be involved in cellular response to nitrogen starvation and macroautophagy. Predicted to act upstream of or within autophagy. Predicted to be located in membrane. Predicted to be active in autophagosome membrane. Is expressed in forerunner cell group; nervous system; neural tube; skeletal muscle; and tail bud. Human ortholog(s) of this gene implicated in glioblastoma. Orthologous to human MAP1LC3A (microtubule associated protein 1 light chain 3 alpha).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 14 figures from 8 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:77094 (9 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Autophagy protein Atg8 ubiquitin-like | Ubiquitin-like domain superfamily |
|---|---|---|---|---|
| UniProtKB:Q6NX90 | InterPro | 121 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
map1lc3a-201
(1)
|
Ensembl | 1,511 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers