ZFIN ID: ZDB-GENE-040426-2209
Gene Name: epithelial cell adhesion molecule
Gene Symbol: epcam
Sequence Ontology ID : SO:0000704

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Previous Names: pan-epithelial glycoprotein (1), sb:cb6, tacstd, wu:fj17g02, zgc:110304 (1), zgc:77119

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 23 figures from 17 publications
Directly Submitted Expression Data: 6 figures (24 images) from Thisse et al., 2001 [cb6]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi2151Tg Transgenic Insertion Unknown Unknown DNA
hi2836Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22225 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 17 figures from 5 publications
    Observed in:
    DISEASE ASSOCIATED WITH epcam HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    congenital diarrhea 5 with tufting enteropathy Diarrhea 5, with tufting enteropathy, congenital 613217
    hereditary nonpolyposis colorectal cancer type 8 Colorectal cancer, hereditary nonpolyposis, type 8 613244
    Lynch syndrome Colorectal cancer, hereditary nonpolyposis, type 8 613244
    DISEASE ASSOCIATED WITH epcam VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell-cell adhesion (more)
    Cellular Component basolateral plasma membrane (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000716 (1)
  • InterPro:IPR036857 (1)
  • PROSITE:PS00484 (1)
  • PROSITE:PS51162 (1)
  • Pfam:PF00086 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA epcam-001 (1) 1377
    ncRNA epcam-002 (1) 520
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM epcam No data available
    MARKER RELATIONSHIPS
    epcamContained in: [BAC] CH73-105B23 (1) (order this)
    epcamContains: [SNP] rs3728535 (1), rs3728536 (1)
    epcamEncodes: [EST] cb6 (1) (order this), fj17g02
    [cDNA] MGC:77119 (1) (order this), MGC:110304 (1) (order this)
    epcamHas Artifact: [EST] fb11f01
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017593 (1) 1297bp
    Genomic GenBank:CU570977 (1) 114114bp
    Select Tool
    Polypeptide UniProtKB:B8JM11 (1) 303aa
    Sequence Clusters UniGene:39071 (1)
    Sequence Information (all 22)
    OTHER epcam GENE PAGES
  • Alliance (1)
  • Gene:406454 (1)
  • VEGA:OTTDARG00000029417 (1)
  • ORTHOLOGY for epcam (Chr: 13)
    CITATIONS (55)