ZFIN ID: ZDB-GENE-040426-2195
Gene Name: lysine (K)-specific demethylase 2Ba
Gene Symbol: kdm2ba    Nomenclature History

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Previous Names: wu:fd13a09, zgc:85787

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have DNA binding activity and zinc ion binding activity. Orthologous to human KDM2B (lysine demethylase 2B).
Genome Resources: Alliance (1),  Gene:406446 (1),  Ensembl(GRCz11):ENSDARG00000036593 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026557Tg Transgenic Insertion Unknown Unknown DNA
sa10959 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21355 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44693 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH kdm2ba HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH kdm2ba VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function DNA binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001810 F-box domain
    Domain IPR001965 Zinc finger, PHD-type
    Domain IPR002857 Zinc finger, CXXC-type
    Homologous_superfamily IPR011011 Zinc finger, FYVE/PHD-type
    Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
    Conserved_site IPR019786 Zinc finger, PHD-type, conserved site
    Domain IPR019787 Zinc finger, PHD-finger
    Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
    TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM kdm2ba No data available
    MARKER RELATIONSHIPS
    kdm2ba Encodes: [EST] fd13a09
    [cDNA] MGC:85787 (1), MGC:158608 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213167 (1) 3524 bp
    Genomic GenBank:CABZ01044756 (1) 44894 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RPZ5 (1) 883 aa
    Sequence Information (all 27)
    ORTHOLOGY for kdm2ba ( Chr: 8 )
    CITATIONS (22)