ZFIN ID: ZDB-GENE-040426-2186
Gene Name: small ubiquitin like modifier 1
Gene Symbol: sumo1
Sequence Ontology ID : SO:0000704

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Previous Names: fd12c02, hm:zeh0670, wu:fb74c02, wu:fd12c02 (1), zgc:65934, zgc:85634 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein tag; involved in chordate embryonic development and definitive hemopoiesis; predicted to localize to the nuclear stress granule; orthologous to human SUMO1 (small  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6907399]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH sumo1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
orofacial cleft 10 ?Orofacial cleft 10 613705
DISEASE ASSOCIATED WITH sumo1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process chordate embryonic development (more)
Cellular Component nuclear stress granule (more)
Molecular Function protein tag (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR022617 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR033950 (1)
  • PROSITE:PS50053 (1)
  • Pfam:PF11976 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sumo1-201 (1) 1436
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sumo1 No data available
    MARKER RELATIONSHIPS
    sumo1Contained in: [BAC] CH211-106F9 (1) (order this)
    sumo1Encodes: [EST] fb74c02 (1), fd12c02, IMAGE:6907399 (1) (order this), zeh0670 (1)
    [cDNA] MGC:65934 (1) (order this), MGC:85634 (order this), MGC:174015 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213159 (1) 1455bp
    Genomic GenBank:BX927225 (1) 161068bp
    Select Tool
    Polypeptide UniProtKB:A7MCK6 (1) 100aa
    Sequence Clusters UniGene:162042 (1)
    Sequence Information (all 24)
    OTHER sumo1 GENE PAGES
  • Alliance (1)
  • Gene:406438 (1)
  • VEGA:OTTDARG00000019764 (1)
  • Ensembl(GRCz11):ENSDARG00000044267 (2)
  • ORTHOLOGY for sumo1 (Chr: 6)
    CITATIONS (29)