ZFIN ID: ZDB-GENE-040426-2133
Gene Name: small ubiquitin like modifier 3a
Gene Symbol: sumo3a
Sequence Ontology ID : SO:0000704

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Previous Names: sumo3 (1), sumo3l, fa94a11 (1), im:7141764, wu:fa94a11 (1), wu:fb55d09, zgc:65847, zgc:85643 (1)

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein tag; involved in chordate embryonic development and definitive hemopoiesis; predicted to localize to the nucleus; orthologous to human SUMO3 (small ubiquitin-like modifier  ...
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:65847]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138665]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7141764]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011488Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15762 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sumo3a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sumo3a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chordate embryonic development (more)
    Cellular Component cytoplasm (more)
    Molecular Function protein tag (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR022617 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR033950 (1)
  • PROSITE:PS50053 (1)
  • Pfam:PF11976 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA sumo3a-002 (1) 825
    sumo3a-003 (1) 808
    sumo3a-004 (1) 723
    sumo3a-005 (1) 961
    sumo3a-006 (1) 582
    mRNA sumo3a-201 (1) 1487
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sumo3a No data available
    MARKER RELATIONSHIPS
    sumo3aContained in: [BAC] DKEY-176G1 (1) (order this)
    sumo3aEncodes: [EST] fa94a11, fb55d09, IMAGE:7138665 (1) (order this), IMAGE:7141764 (1) (order this)
    [cDNA] MGC:65847 (1) (order this), MGC:85643 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213124 (1) 1546bp
    Genomic GenBank:BX548046 (1) 168695bp
    Select Tool
    Polypeptide UniProtKB:Q6NV25 (1) 94aa
    Sequence Clusters UniGene:1291 (1)
    Sequence Information (all 20)
    OTHER sumo3a GENE PAGES
  • Alliance (1)
  • Gene:406398 (1)
  • VEGA:OTTDARG00000019765 (1)
  • Ensembl(GRCz11):ENSDARG00000028119 (2)
  • ORTHOLOGY for sumo3a (Chr: 6)
    CITATIONS (31)