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ZIRC
ZFIN ID: ZDB-GENE-040426-2122
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Gene Name: poly(rC) binding protein 4
Gene Symbol: pcbp4
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fc68f03, zgc:65870, zgc:77347 (1)

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Orthologous to human PCBP4 (poly(rC) binding protein 4).
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (12 images) from Rauch et al., 2003 [MGC:65870]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028443Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa39380 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pcbp4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pcbp4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004087 (1)
  • InterPro:IPR004088 (1)
  • InterPro:IPR033088 (1)
  • InterPro:IPR036612 (1)
    		•
  • Pfam:PF00013 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pcbp4-202 (1) 4125
    Select Tool
    pcbp4-203 (1) 650
    Select Tool
    pcbp4-204 (1) 455
    Select Tool
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pcbp4 No data available
    MARKER RELATIONSHIPS
    pcbp4Contained in: [BAC] CH73-50K9 (1) (order this), CH73-167F18 (1) (order this), DKEY-9N18 (1) (order this)
    pcbp4Encodes: [EST] fc68f03
    [cDNA] MGC:65870 (1) (order this), MGC:77347 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213117 (1) 4150bp
    Select Tool
    Genomic GenBank:AL954840 (1) 167004bp
    Select Tool
    Polypeptide UniProtKB:F1Q8M8 (1) 464aa
    Select Tool
    Sequence Clusters UniGene:4035 (1)
    Sequence Information (all 38)
    OTHER pcbp4 GENE PAGES
  • Alliance (1)
  • Gene:406391 (1)
  • VEGA:OTTDARG00000032921 (1)
  • Ensembl(GRCz11):ENSDARG00000024276 (2)
    • ORTHOLOGY for pcbp4 (Chr: 22)
    CITATIONS (19)