ZFIN ID: ZDB-GENE-040426-2103
Gene Name: tudor domain containing 7 a
Gene Symbol: tdrd7a    Nomenclature History

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Previous Names: tdrd7, si:ch211-288h2.2, wu:fi12c12, zgc:56669 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have mRNA binding activity. Involved in P granule organization. Localizes to P granule. Is expressed in blastodisc; blastomere; and primordial germ cell. Human ortholog(s) of this gene implicated in cataract 36. Orthologous to human TDRD7 (tudor domain containing 7).
Genome Resources: Alliance (1),  Gene:406379 (1),  Ensembl(GRCz11):ENSDARG00000032808 (1)
GENE EXPRESSION
All Expression Data: 8 figures from 3 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [MGC:56669]
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-tdrd7a N/A 1
MO2-tdrd7a N/A 1
MO3-tdrd7a N/A 1
DISEASE ASSOCIATED WITH tdrd7a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
cataract 36 Alliance Cataract 36 613887
DISEASE ASSOCIATED WITH tdrd7a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process P granule organization (more)
Cellular Component P granule (more)
Molecular Function mRNA binding (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA tdrd7a-201 (1)    Ensembl 3736
tdrd7a-202 (1)    Ensembl 644
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM tdrd7a No data available
MARKER RELATIONSHIPS
tdrd7a Contained in: [BAC] CH211-288H2 (1)
tdrd7a Encodes: [EST] fi12c12 (1)
tdrd7a Has Artifact: [cDNA] MGC:56669 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001099343 (1) 3707 nt
Genomic GenBank:CR388406 (1) 161800 nt
Select Tool
Polypeptide UniProtKB:A6NAF9 (1) 1079 aa
Sequence Information (all 16)
ORTHOLOGY for tdrd7a ( Chr: 1 )
CITATIONS (39)