ZFIN ID: ZDB-GENE-040426-21
Gene Name: biglycan b
Gene Symbol: bgnb
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:77123 (1)

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (12 images) from Thisse et al., 2004 [MGC:77123]
  7 figures (21 images) from Thisse et al., 2008 [cssl:d0377]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH bgnb HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Meester-Loeys syndrome 300989
Meester-Loeys syndrome 300989
Spondyloepimetaphyseal dysplasia, X-linked 300106
Spondyloepimetaphyseal dysplasia, X-linked 300106
DISEASE ASSOCIATED WITH bgnb VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cytokine-mediated signaling pathway (more)
Cellular Component extracellular region (more)
Molecular Function protein kinase inhibitor activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000372 (1)
  • InterPro:IPR001611 (1)
  • InterPro:IPR003591 (1)
  • InterPro:IPR016352 (1)
  • InterPro:IPR028547 (1)
  • InterPro:IPR032675 (1)
  • PROSITE:PS51450 (1)
  • Pfam:PF01462 (1)
  • Pfam:PF13855 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bgnb-001 (1) 2844
    ncRNA bgnb-002 (1) 2968
    bgnb-003 (1) 455
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM bgnb No data available
    MARKER RELATIONSHIPS
    bgnbContained in: [BAC] DKEY-32E6 (1) (order this), DKEYP-1G12 (1)
    bgnbEncodes: [EST] cssl:d0377 (1) (order this)
    [cDNA] MGC:77123 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001001825 (1) 2810bp
    Genomic GenBank:AL953864 (1) 249608bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q6PBP5 (1) 389aa
    Sequence Clusters UniGene:85329 (1)
    Sequence Information (all 23)
    OTHER bgnb GENE PAGES
  • Alliance (1)
  • Gene:792197 (1)
  • VEGA:OTTDARG00000021906 (1)
  • ORTHOLOGY for bgnb (Chr: 23)
    CITATIONS (20)