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ZIRC
ZFIN ID: ZDB-GENE-040426-2094
Gene Name: forkhead box D1
Gene Symbol: foxd1    Nomenclature History

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Previous Names: FoxD1.1 (1), foxd1l, zgc:76875 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in anatomical structure morphogenesis; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to localize to the nucleus. Is expressed in central nervous system; head; immature eye; and neural crest. Orthologous to human FOXD1 (forkhead box D1).
Genome Resources: Alliance (1),  Gene:405849 (1),  Ensembl(GRCz11):ENSDARG00000029179 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
el551 Insertion Unknown Unknown TALEN
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
TALEN1-foxd1 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH foxd1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH foxd1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 9)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA foxd1-201 (1)    Ensembl 1791
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM foxd1 No data available
MARKER RELATIONSHIPS
foxd1 Contained in: [BAC] CH211-195C22 (1) (order this)
foxd1 Encodes: [cDNA] MGC:76875 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_212913 (1) 1828 bp
Genomic GenBank:CR377210 (1) 170134 bp
Select Tool
Polypeptide UniProtKB:A2CE80 (1) 343 aa
Sequence Clusters UniGene:82970 (1)
Sequence Information (all 10)
ORTHOLOGY for foxd1 ( Chr: 5 )
CITATIONS (28)