ZFIN ID: ZDB-GENE-040426-2049
Gene Name: short chain dehydrogenase/reductase family 16C, member 5a
Gene Symbol: sdr16c5a    Nomenclature History

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Previous Name: zgc:76925

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to localize to lipid droplet. Orthologous to human SDR16C5 (short chain dehydrogenase/reductase family 16C member 5).
Genome Resources: Alliance (1),  Gene:405814 (1),  Ensembl(GRCz11):ENSDARG00000016233 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13390 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sdr16c5a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sdr16c5a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Cellular Component lipid droplet (more)
    Molecular Function oxidoreductase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sdr16c5a-201 (1)    Ensembl 1379
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sdr16c5a No data available
    MARKER RELATIONSHIPS
    sdr16c5a Contained in: [BAC] DKEY-72L21 (1) (order this)
    sdr16c5a Encodes: [cDNA] MGC:76925 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_212878 (1) 1311 nt
    Genomic GenBank:BX890600 (1) 200995 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QN16 (1) 317 aa
    Sequence Information (all 13)
    ORTHOLOGY for sdr16c5a ( Chr: 2 )
    CITATIONS (18)