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General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2020
Gene Name: cell cycle associated protein 1b
Gene Symbol: caprin1b
Sequence Ontology ID : SO:0000704

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Previous Names: caprin1, fe25d09, ik:tdsubc_2d9, wu:fa96f04, wu:fe25d09, wu:fj66h11, xx:tdsubc_2d9, zgc:55902

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human CAPRIN1 (cell cycle associated protein 1).
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23351 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29071 Point Mutation Unknown Splice Site ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH caprin1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH caprin1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR022070 (1)
  • InterPro:IPR028816 (1)
  • InterPro:IPR041637 (1)
  • Pfam:PF12287 (1)
  • Pfam:PF18293 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA caprin1b-004 (1) 902
    mRNA caprin1b-201 (1) 2654
    caprin1b-202 (1) 615
    caprin1b-203 (1) 595
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM caprin1b No data available
    MARKER RELATIONSHIPS
    caprin1bContained in: [BAC] CH73-110E4 (1) (order this), DKEY-10O6 (1) (order this)
    caprin1bEncodes: [EST] fa96f04 (1), fe25d09, fj66h11 (1), tdsubc_2d9 (1)
    [cDNA] MGC:55902 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213068 (1) 2667bp
    Genomic GenBank:CT025900 (1) 126992bp
    Select Tool
    Polypeptide UniProtKB:A5WVQ1 (1) 695aa
    Sequence Clusters UniGene:32745 (1)
    Sequence Information (all 26)
    ORTHOLOGY for caprin1b (Chr: 18)
    CITATIONS (14)