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ZIRC
ZFIN ID: ZDB-GENE-040426-1881
Gene Name: U2 small nuclear RNA auxiliary factor 2b
Gene Symbol: u2af2b
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: wu:fb73g02, zgc:77804

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have poly-pyrimidine tract binding activity and pre-mRNA 3'-splice site binding activity. Predicted to be involved in RNA splicing and mRNA processing. Predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:77804]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7162798]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027986Tg Transgenic Insertion Unknown Unknown DNA
sa3012 Point Mutation Unknown Splice Site ENU
sa14700 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43235 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH u2af2b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH u2af2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA processing (more)
    Cellular Component nucleus (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA u2af2b-005 (1) 789
    mRNA u2af2b-201 (1) 2665
    u2af2b-203 (1) 858
    u2af2b-204 (1) 836
    u2af2b-205 (1) 735
    u2af2b-206 (1) 890
    u2af2b-207 (1) 824
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM u2af2b No data available
    MARKER RELATIONSHIPS
    u2af2b Contained in: [BAC] CH211-232M10 (1) (order this)
    u2af2b Encodes: [EST] fb73g02 (1), IMAGE:7162798 (1) (order this)
    [cDNA] MGC:77804 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205689 (1) 1565 bp
    Genomic GenBank:BX950195 (1) 149624 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IMP0 (1) 480 aa
    Sequence Clusters UniGene:77328 (1)
    Sequence Information (all 32)
    ORTHOLOGY for u2af2b ( Chr: 19 )
    CITATIONS (27)