ZFIN ID: ZDB-GENE-040426-1873
Gene Name: RAD1 homolog (S. pombe)
Gene Symbol: rad1    Nomenclature History

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Previous Names: zgc:56502, zgc:77779

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have 3'-5' exonuclease activity. Predicted to be involved in DNA damage checkpoint and DNA repair. Predicted to localize to checkpoint clamp complex. Orthologous to human RAD1 (RAD1 checkpoint DNA exonuclease).
Genome Resources: Alliance (1),  Gene:393872 (1),  Ensembl(GRCz11):ENSDARG00000040559 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56502]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rad1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rad1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process DNA damage checkpoint (more)
Cellular Component host cell nucleus (more)
Molecular Function 3'-5' exonuclease activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA rad1-201 (1)    Ensembl 1653
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM rad1 No data available
MARKER RELATIONSHIPS
rad1 Contained in: [BAC] CH211-167J9 (1)
rad1 Encodes: [cDNA] MGC:56502 (1), MGC:77779 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200898 (1) 1624 nt
Genomic GenBank:CR848814 (1) 79851 nt
Select Tool
Polypeptide UniProtKB:Q6P2T4 (1) 279 aa
Sequence Information (all 12)
ORTHOLOGY for rad1 ( Chr: 15 )
CITATIONS (17)