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ZIRC
ZFIN ID: ZDB-GENE-040426-1846
Gene Name: sterol carrier protein 2a
Gene Symbol: scp2a    Nomenclature History

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Previous Names: scp2, zgc:77634

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have transferase activity, transferring acyl groups other than amino-acyl groups. Predicted to be involved in positive regulation of intracellular cholesterol transport. Is expressed in intestinal bulb; lens; liver; and solid lens vesicle. Orthologous to human SCP2 (sterol carrier protein 2).
Genome Resources: Alliance (1),  Gene:393839 (1),  Ensembl(GRCz11):ENSDARG00000012194 (2)
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (5 images) from Thisse et al., 2004 [MGC:77634]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH scp2a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Leukoencephalopathy with dystonia and motor neuropathy 613724
DISEASE ASSOCIATED WITH scp2a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of intracellular cholesterol transport (more)
Molecular Function catalytic activity (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA scp2a-201 (1)    Ensembl 2327
ncRNA scp2a-002 (1)    Ensembl 539
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM scp2a No data available
MARKER RELATIONSHIPS
scp2a Contained in: [BAC] CH211-284B7 (1) (order this)
scp2a Encodes: [cDNA] MGC:77634 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200865 (1) 2268 bp
Genomic GenBank:AL954171 (1) 148854 bp
Select Tool
Polypeptide UniProtKB:Q6P4V5 (1) 538 aa
Sequence Clusters UniGene:82469 (1)
Sequence Information (all 13)
ORTHOLOGY for scp2a ( Chr: 2 )
CITATIONS (22)