ZFIN ID: ZDB-GENE-040426-1819
Gene Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Symbol: snrpb    Nomenclature History

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Previous Name: zgc:77315 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to cytoplasm; spliceosomal complex; and spliceosomal snRNP complex. Human ortholog(s) of this gene implicated in cerebrocostomandibular syndrome and mixed connective tissue disease. Orthologous to several human genes including SNRPB (small nuclear ribonucleoprotein polypeptides B and B1).
Genome Resources: Alliance (1),  Gene:402966 (1),  Ensembl(GRCz11):ENSDARG00000011125 (2)
GENE EXPRESSION
All Expression Data: Fig. 4 from Iwanami et al., 2016
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31546 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH snrpb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snrpb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA splicing, via spliceosome (more)
    Cellular Component nucleus (more)
    Molecular Function RNA binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA snrpb-201 (1)    Ensembl 963
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snrpb No data available
    MARKER RELATIONSHIPS
    snrpb Contained in: [BAC] CH211-60J9 (1)
    snrpb Encodes: [cDNA] MGC:77315 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_205667 (1) 1010 nt
    Genomic GenBank:CU929339 (1) 181638 nt
    Select Tool
    Polypeptide UniProtKB:Q9I9E5 (1) 239 aa
    Sequence Information (all 12)
    ORTHOLOGY for snrpb ( Chr: 6 )
    CITATIONS (20)