ZFIN ID: ZDB-GENE-040426-1746
Gene Name: transcription factor Dp-1, b
Gene Symbol: tfdp1b    Nomenclature History

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Previous Names: tfdp1 (1), hm:zeh1183, zeh1183, zgc:73281

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Is expressed in adaxial cell; alar plate midbrain region; nervous system; and optic vesicle. Orthologous to human TFDP1 (transcription factor Dp-1).
Genome Resources: Alliance (1),  Gene:393749 (1),  Ensembl(GRCz11):ENSDARG00000016304 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2004 [MGC:73281]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:6906520]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013555Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39526 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tfdp1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tfdp1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of cell cycle (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tfdp1b-201 (1)    Ensembl 1642
    tfdp1b-202 (1)    Ensembl 1243
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tfdp1b No data available
    MARKER RELATIONSHIPS
    tfdp1b Contained in: [BAC] CH73-367P20 (1), CH211-129C2 (1)
    tfdp1b Encodes: [EST] IMAGE:6906520 (1), zeh1183
    [cDNA] MGC:73281 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200776 (1) 1662 nt
    Genomic GenBank:CU179747 (1) 162432 nt
    Select Tool
    Polypeptide UniProtKB:Q6PBR6 (1) 386 aa
    Sequence Information (all 24)
    ORTHOLOGY for tfdp1b ( Chr: 1 )
    CITATIONS (29)