Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1727
Gene Name: Rho GTPase activating protein 12b
Gene Symbol: arhgap12b
Previous Names: arhgap12, zgc:73239 (1)
Location: Chr: 12   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [IMAGE:7151471]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
  retina, somite, unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process signal transduction (more)
Cellular Component intracellular (more)
Molecular Function GTPase activator activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000198 (1)
  • InterPro:IPR001202 (1)
  • InterPro:IPR001452 (1)
  • InterPro:IPR001849 (1)
  • InterPro:IPR008936 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR015767 (1)
  • PROSITE:PS50002 (1)
  • PROSITE:PS50003 (1)
  • PROSITE:PS50020 (1)
  • PROSITE:PS50238 (1)
  • Pfam:PF00169 (1)
  • Pfam:PF00397 (1)
  • Pfam:PF00620 (1)
  • Pfam:PF14604 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arhgap12b-001 (1) 4227
    ncRNA arhgap12b-002 (1) 5037
    mRNA arhgap12b-003 (1) 831
    arhgap12b-004 (1) 463
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM arhgap12b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    arhgap12b Contained in: [BAC] DKEY-148D16 (1)
    arhgap12b Encodes: [EST] IMAGE:7151471 (1) (order this)
    [cDNA] MGC:73239 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200874 (1) 4200 bp
    Genomic GenBank:BX470098 (1) 249826 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1R1Z3 (1) 817 aa
    Sequence Clusters UniGene:67202 (1)
    Sequence Information (all 25)
    OTHER arhgap12b GENE PAGES
  • Gene:393848 (1)
  • VEGA:OTTDARG00000020596 (1)
  • Ensembl(Zv9):ENSDARG00000026482 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish arhgap12b 12  
    Human ARHGAP12 10 (10p11.22)
  • OMIM:610577
  • Gene:94134
  • Mouse Arhgap12 18 ( 4.46 cM)
  • MGI:1922665
  • Gene:75415
  • Orthology Details
    CITATIONS (14)