ZFIN ID: ZDB-GENE-040426-1721
Gene Name: heat shock factor binding protein 1b
Gene Symbol: hsbp1b    Nomenclature History

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Previous Names: hsbp1, zgc:73224 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have serine-type endopeptidase activity. Involved in central nervous system development and neural crest formation. Is expressed in head. Orthologous to human HSBP1 (heat shock factor binding protein 1).
Genome Resources: Alliance (1),  Gene:393727 (1),  Ensembl(GRCz11):ENSDARG00000041921 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:73224]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-hsbp1b N/A 1
MO2-hsbp1b N/A 1
DISEASE ASSOCIATED WITH hsbp1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hsbp1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process central nervous system development (more)
Molecular Function transcription corepressor activity (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA hsbp1b-201 (1)    Ensembl 786
hsbp1b-203 (1)    Ensembl 389
ncRNA hsbp1b-002 (1)    Ensembl 604
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM hsbp1b No data available
MARKER RELATIONSHIPS
hsbp1b Contained in: [BAC] DKEY-204J6 (1) (order this), DKEY-246G23 (1) (order this)
hsbp1b Encodes: [cDNA] MGC:73224 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200754 (1) 666 nt
Genomic GenBank:BX908742 (1) 232903 nt Blast at MegaBLAST
Polypeptide UniProtKB:Q6PBV8 (1) 76 aa
Sequence Information (all 13)
ORTHOLOGY for hsbp1b ( Chr: 18 )
CITATIONS (21)