ZFIN ID: ZDB-GENE-040426-1710
Gene Name: endothelial differentiation-related factor 1
Gene Symbol: edf1    Nomenclature History

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Previous Names: zgc:73192, zgc:86829

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to localize to nucleus. Orthologous to human EDF1 (endothelial differentiation related factor 1).
Genome Resources: Alliance (1),  Gene:793036 (1),  Ensembl(GRCz11):ENSDARG00000009950 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:73192]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la025255Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH edf1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH edf1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA edf1-201 (1)    Ensembl 1041
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM edf1 No data available
MARKER RELATIONSHIPS
edf1 Contained in: [Fosmid] CH1073-363C19 (1)
edf1 Encodes: [cDNA] MGC:73192 (1), MGC:86829 (1), MGC:174483 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200745 (1) 868 nt
Genomic GenBank:BX950178 (1) 175858 nt
Select Tool
Polypeptide UniProtKB:A5PN46 (1) 146 aa
Sequence Information (all 21)
ORTHOLOGY for edf1 ( Chr: 5 )
CITATIONS (25)